BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029B05SP1|AL429014
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1728 1732 0.0
>3x_Contig1728
Length = 20685
Score = 1732 bits (873), Expect = 0.0
Identities = 901/905 (99%), Gaps = 4/905 (0%)
Strand = Plus / Plus
Query: 2 ccatcttcagaaaatgatatggcaaggacgatttcaaggatataatcaactacgtcaagg 61
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ccatcttcagaaaatg-tatggcaaggacgatttcaaggatataatcaactacgtcaagg 265
Query: 62 acgcaaagaatgatcttgaaacgataatgaaatatgaggatgaggagggtttaggaaccg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acgcaaagaatgatcttgaaacgataatgaaatatgaggatgaggagggtttaggaaccg 325
Query: 122 cttcagaagaagaagcaaaaccagaaacctagaaaaaggagtatgctcaatgaacggaat 181
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 326 cttcagaagaagaagcaaaacc-gaaacctagaaaaaggagtatgctcaatgaacggaat 384
Query: 182 aagcctgccgaaaagaaagcaagaccagatgtcatacatgtcaccgagaatcacattcct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagcctgccgaaaagaaagcaagaccagatgtcatacatgtcaccgagaatcacattcct 444
Query: 242 gaggaagaaaaacgttctagacattataatcttcgtgctaagtcaaagcttaggtctttc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaggaagaaaaacgttctagacattataatcttcgtgctaagtcaaagcttaggtctttc 504
Query: 302 aatcgtgatgactgaacgaaattcaatatttaaggaacgaaaacactatgtaaccatata 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatcgtgatgactgaacgaaattcaatatttaaggaacgaaaacactatgtaaccatata 564
Query: 362 aattaaagaactttaattgactccagcggattgcgttgccagcaatgtttaatgcaatca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aattaaagaactttaattgactccagcggattgcgttgccagcaatgtttaatgcaatca 624
Query: 422 cttaggtcgaatgttttatctattcagtcatccgtaacttaaaaagttttcccctattgt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cttaggtcgaatgttttatctattcagtcatccgtaacttaaaaagttttcccctattgt 684
Query: 482 catgcaaaaagataatattttgaaaaataaactagaatgaaatagtaccttgacgctggc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 catgcaaaaagataatattttgaaaaataaactagaatgaaatagtaccttgacgctggc 744
Query: 542 ctacaatccgtacaggattgtggtaaagtgcttgttataaaggaaaatatatggggaagc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctacaatccgtacaggattgtggtaaagtgcttgttataaaggaaaatatatggggaagc 804
Query: 602 ttgatgaaggtgcgggctatgtggaaagaaaataggcgctatttctcatctaggtggttt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttgatgaaggtgcgggctatgtggaaagaaaataggcgctatttctcatctaggtggttt 864
Query: 662 tatgcaattgacattcctaaaaccaaaccttttgaatcagagtatgtaccaaaaacggca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tatgcaattgacattcctaaaaccaaaccttttgaatcagagtatgtaccaaaaacggca 924
Query: 722 cctttwaaaatttcaaccgttctccaaggtcgactccaaacggattgaggacctctatac 781
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ccttt-aaaatttcaaccgttctccaaggtcgactccaaacggattgaggacctctatac 983
Query: 782 ccagaagaatttcagtaggaaacttgatgttaatgaggatcatcttttcgaggttgatct 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 ccagaagaatttcagtaggaaacttgatgttaatgaggatcatcttttcgaggttgatct 1043
Query: 842 ggaaaagttttctatgaatccaatctattgggacggaccatcctatgaaatacg-agagg 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1044 ggaaaagttttctatgaatccaatctattgggacggaccatcctatgaaatacgaagagg 1103
Query: 901 tatct 905
|||||
Sbjct: 1104 tatct 1108
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7670
Number of Sequences: 1807
Number of extensions: 7670
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)